compare two species based on presence/absence of KEGG KOs
Use this form to check our database for presence of any number of identifiers. Put your identifiers into a plain text file, one identifier per line. After processing,
this script will return a list of matches in iPath's database, and you can limit your element selection calculations to these IDs only.
Direct submission of element selection and parameters
Use the form below to submit your element selection and other parameters directly to the iPath3 interactive interface.
If using this feature programmatically from your own scripts, simply send a POST request with all parameters directly to ipath3.cgi. You have to specify either 'selection' or 'tax_filter', all other parameters are optional.
If you wish to directly create the map in a graphic format, send the POST request to mapping.cgi instead, and specify the export_type as well.
Element selection based on ID overlap
This tool will simply compare two sets of identifiers (which should be supported by iPath, see Supported data types in the help pages, or use the ID validator tool above)
and assign the customization parameters specified below.
Element selection based on numeric data
Use this form to calculate an iPath element selection based on numeric data. Your file should have one identifier per line (which should be supported by iPath, see Supported data types in the help pages,
or use the ID validator tool above), and its corresponding numeric values separated with the field separator selected below. Select the desired calculation type and set the customization parameters.
An example input file is available for download.
Species comparison based on KEGG KOs
This tool will compare the presence of KEGG orthologous groups in two species and assign the customization parameters specified below.