Interactive Pathways Explorer v3

Interactive Pathways Explorer (iPath) is a web-based tool for the visualization, analysis and customization of various pathway maps.

iPath provides extensive map customization and data mapping capablities. Colors, width and opacity of any map element can be changed using various types of data (for example KEGG KOs, COGs or EC numbers). Our help pages provide the full list of supported data types and required formats. Check the video tutorials to get started. All maps in iPath can be easily converted to various bitmap and vector graphical formats for easy inclusion in your documents or further processing.

Available maps

Metabolism

Metabolism

Gives an overview of the complete metabolism in biological systems

Display

Biosynth

Secondary metabolites

An overview of pathways involved in biosynthesis of secondary metabolites

Display

Antibiotic

Antibiotics

An overview of pathways involved in the biosynthesis of various antibiotics

Display

Microbial

Microbial metabolism

Covers microbial metabolism in diverse environments

Display

Legacy versions of iPath are available at http://pathways2.embl.de